Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1616

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_1616: 9984 - K03232 EEF1B elongation factor 1-beta, at 729,946 to 731,113 9984

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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728,972 + -0.3
728,981 + -0.8
729,138 - -1.2
729,247 - +1.1
729,286 - -0.4
729,307 - +0.1
729,391 + -1.7
729,394 - -0.2
729,418 - -0.3
729,447 + -0.0
729,560 + -0.5
729,574 - -0.0
729,863 - -0.5
729,864 - +0.1
729,868 - -2.3
729,871 + -1.7
729,871 - -0.3
729,881 - -0.1
731,537 - -0.6
731,820 - +1.0
731,932 + -1.1

Or see this region's nucleotide sequence