Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2071

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10438 and 10439 are separated by 590 nucleotides mRNA_2070: 10438 - Hypothetical Protein, at 2,600 to 2,887 10438 mRNA_2071: 10439 - HMMPfam-Chromate transporter-PF02417, at 3,478 to 5,448 10439

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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2,482 + +0.7
2,499 - -0.1
2,500 + -0.0
2,502 + +0.5
2,508 + -0.3
2,512 - -0.4
2,513 + +0.8
2,514 - +0.4
2,521 - +0.0
2,522 + -1.0
2,523 - +0.4
2,523 - +1.4
2,638 - 10438 mRNA_2070 0.13 +0.6
2,667 + 10438 mRNA_2070 0.23 +0.5
2,670 - 10438 mRNA_2070 0.24 -0.6
2,763 - 10438 mRNA_2070 0.57 -0.1
2,780 - 10438 mRNA_2070 0.62 +0.4
2,798 - 10438 mRNA_2070 0.69 +0.7
2,805 - 10438 mRNA_2070 0.71 -0.1
2,811 + 10438 mRNA_2070 0.73 -0.8
3,039 - -0.7
3,248 + +0.2
3,318 - +0.3
3,366 + -0.0
3,378 - +1.2
3,380 - +0.8
5,429 + -0.3
5,742 + +0.1
5,875 - +0.8
5,877 + -0.6
5,886 - -0.7
5,887 - +0.3
5,916 - -0.2
6,028 - +0.5
6,071 + -0.5
6,169 - -0.8
6,306 - +0.2
6,345 + +0.2

Or see this region's nucleotide sequence