Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2325

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10692 and 10693 are separated by 379 nucleotides10693 and 10694 are separated by 105 nucleotides mRNA_2324: 10692 - KOG1483 Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily), at 611,623 to 612,935 10692 mRNA_2325: 10693 - Hypothetical Protein, at 613,315 to 614,433 10693 mRNA_2326: 10694 - K03439 trmB, METTL1 tRNA (guanine-N7-)-methyltransferase, at 614,539 to 615,888 10694

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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612,709 + 10692 mRNA_2324 0.83 -0.4
612,712 + 10692 mRNA_2324 0.83 +0.2
612,714 + 10692 mRNA_2324 0.83 +0.8
612,854 + +0.5
613,258 - +1.8
613,885 + 10693 mRNA_2325 0.51 -0.2
614,031 + 10693 mRNA_2325 0.64 -0.2
614,060 - 10693 mRNA_2325 0.67 -1.0
614,354 + -0.4

Or see this region's nucleotide sequence