Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2676

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2676: 11044 - K06672 SCC2, NIPBL cohesin loading factor subunit SCC2, at 747,032 to 753,386 11044

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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746,095 + +0.4
746,104 + +0.6
746,110 - -0.6
746,124 + +0.5
746,151 + +1.7
746,167 + +0.8
746,170 - -0.3
746,248 - +1.3
746,257 + +1.0
746,264 + -0.3
746,276 + +0.2
746,276 - -0.4
746,277 + +0.3
746,278 - +2.7
746,288 - -0.6
746,314 + +0.4
751,553 - 11044 mRNA_2676 0.71 +0.7
754,078 + -0.4
754,088 + +0.4
754,263 - +0.7
754,285 + +0.1
754,321 - +0.0
754,322 - -0.0
754,328 - -0.2
754,332 - +0.2
754,353 + +0.1
754,357 - +0.0
754,379 + -0.6

Or see this region's nucleotide sequence