Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2695

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2695: 11063 - Hypothetical Protein, at 23,956 to 24,690 11063

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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22,975 - +0.3
22,975 - -1.5
23,076 + -1.1
23,235 - -0.8
23,391 - +0.6
23,404 - -0.0
23,406 - +0.8
23,412 - -1.3
23,429 + -0.2
23,435 - -0.4
23,671 - -0.9
23,869 + +0.3
23,872 - +2.0
23,880 + -0.6
23,881 + -0.8
24,034 + 11063 mRNA_2695 0.11 -0.9
24,054 + 11063 mRNA_2695 0.13 -2.7
24,292 + 11063 mRNA_2695 0.46 -0.4
24,302 - 11063 mRNA_2695 0.47 +1.2
24,475 + 11063 mRNA_2695 0.71 +0.2
24,520 - 11063 mRNA_2695 0.77 +0.7
24,557 - 11063 mRNA_2695 0.82 +0.3
24,577 - 11063 mRNA_2695 0.84 -1.2
24,578 - 11063 mRNA_2695 0.85 +0.4
24,632 + +0.9
24,734 + +0.6
24,742 + +0.8
24,743 + +0.9
24,759 - +0.6
24,880 - -0.3
24,881 - -1.2
24,882 - -1.0
24,884 - +0.1
24,887 - -0.0
24,890 + -1.6
24,893 + +1.2
24,898 - +0.3
24,906 - +0.5
24,910 - +0.3
24,988 + -0.0
25,051 + +1.1
25,101 - -0.3
25,175 - +0.8
25,194 - -0.2
25,236 + -0.4
25,258 - +0.3
25,263 - +0.9
25,292 - -0.7
25,294 - +0.8
25,294 - +0.3
25,313 + +0.5
25,344 - -0.2
25,362 - -0.5
25,376 + +0.1
25,439 - -0.5
25,447 + -1.0
25,459 + +1.4
25,466 - -0.3
25,469 - +0.7
25,471 - -0.3
25,575 + +1.1
25,586 + +0.5
25,642 + -1.1
25,654 - +0.7
25,668 + +1.2

Or see this region's nucleotide sequence