Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2915

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2915: 11283 - Hypothetical Protein, at 533,180 to 533,383 11283

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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532,195 - -0.2
532,217 + +0.6
532,394 - -0.7
532,394 + -0.2
532,403 - -0.0
532,408 - -0.4
532,542 - -1.3
532,557 + +0.2
532,570 + +1.3
532,626 - -0.3
532,644 + -1.9
532,663 + -0.8
532,687 - -0.4
532,689 + -0.2
532,695 - -0.3
532,699 + -1.3
532,705 + -1.3
532,767 + +0.8
532,827 + -0.1
532,828 - +0.2
532,951 + -0.4
532,953 - +0.3
532,999 + -0.2
533,001 + +0.6
533,025 - +0.5
533,076 - -0.5
533,076 + +0.6
533,084 + -1.1
533,088 + +0.2
533,091 + +0.4
533,117 - -0.0
533,142 + +0.3
533,253 - 11283 mRNA_2915 0.36 -0.1
533,254 - 11283 mRNA_2915 0.36 +0.5
533,304 + 11283 mRNA_2915 0.61 +1.4
533,408 - -0.5
533,416 - +0.2
533,459 + +0.6
533,580 - +0.1
533,581 - +0.2
533,594 - +0.8
533,595 - +0.2
533,620 + -0.1
533,742 - +0.4
533,938 + -0.8
534,073 + -0.2
534,201 + -0.2
534,210 - -0.3
534,214 + -1.2
534,219 - -0.7
534,220 + -0.1
534,224 + -1.6
534,362 - +0.8
534,364 - +0.6
534,379 + +0.4

Or see this region's nucleotide sequence