Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3243

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11610 and 11611 are separated by 385 nucleotides11611 and 11612 are separated by 849 nucleotides mRNA_3242: 11610 - K01814 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, at 194,883 to 196,226 11610 mRNA_3243: 11611 - K10752 RBBP4, HAT2, CAF1, MIS16 histone-binding protein RBBP4, at 196,612 to 198,456 11611 mRNA_3244: 11612 - Hypothetical Protein, at 199,306 to 200,606 11612

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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196,405 - +0.4
196,431 + -0.7
196,439 + +0.1
196,563 + -0.6
196,571 + +0.5
196,582 + -0.2
198,330 - +0.6
198,422 + -0.5
198,901 - +0.7
199,024 + -0.4
199,061 + +0.7
199,075 + +0.5
199,079 - +0.4
199,237 - +0.2
199,405 - -0.1

Or see this region's nucleotide sequence