Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3337

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11704 and 11705 are separated by 307 nucleotides mRNA_3336: 11704 - K07827 KRAS, KRAS2 GTPase KRas, at 415,691 to 416,703 11704 mRNA_3337: 11705 - KOG3336 Predicted member of the intramitochondrial sorting protein family, at 417,011 to 417,925 11705

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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416,076 - 11704 mRNA_3336 0.38 -0.9
416,076 - 11704 mRNA_3336 0.38 +0.7
416,118 + 11704 mRNA_3336 0.42 +0.5
416,310 - 11704 mRNA_3336 0.61 -0.3
416,486 + 11704 mRNA_3336 0.78 -0.5
416,522 + 11704 mRNA_3336 0.82 +1.3
417,015 - +0.1
418,016 - +0.8
418,037 - -0.3
418,125 - +1.0
418,201 - +1.6
418,329 - +0.7
418,479 - +0.3
418,663 + -1.0
418,781 + -1.0

Or see this region's nucleotide sequence