Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3988

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12356 and 12357 are separated by 343 nucleotides mRNA_3988: 12356 - Hypothetical Protein, at 1,084,806 to 1,085,290 12356 mRNA_3989: 12357 - BLAST Ribonucleases P/MRP protein subunit pop3 [Hypsizygus ..., at 1,085,634 to 1,087,441 12357

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,084,052 + +0.6
1,084,068 + -0.4
1,084,738 + +0.4
1,084,774 - -0.9
1,085,170 - 12356 mRNA_3988 0.75 -0.2

Or see this region's nucleotide sequence