Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5184

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5184: 13552 - K03017 RPB9, POLR2I DNA-directed RNA polymerase II subunit RPB9, at 95,011 to 95,960 13552

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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94,468 + -0.6
94,479 + +1.4
94,499 + +1.2
94,610 - +0.3
94,616 + -0.2
94,621 - +0.1
94,632 + -0.9
94,633 + +0.1
94,680 - +0.4
94,762 - -1.5
94,774 - +0.9
94,907 - +1.3
94,922 + -0.5
95,807 - 13552 mRNA_5184 0.84 +0.7
95,943 + +3.2
95,948 + +1.1
95,948 + +0.5
95,961 + +0.1
95,970 + -0.2
95,985 + +0.0
95,995 + +0.3
96,094 + -0.1
96,118 + +1.0
96,119 - +0.1
96,120 + -0.1
96,126 - -0.3
96,127 - +0.1
96,127 + +1.7
96,128 + +0.1
96,146 + -0.2
96,148 - +0.7
96,149 + +0.5
96,163 + -0.2
96,253 - -0.0
96,253 + -0.3
96,262 + +0.5
96,267 + +0.4
96,280 + -1.3
96,298 + +1.0
96,317 + +1.7
96,422 - -0.5
96,425 - +1.3
96,449 + +0.1
96,585 + +0.1
96,586 + -0.2
96,601 - -1.0
96,603 + +0.6
96,606 + -0.4
96,610 + -0.1
96,702 - +0.4
96,730 - -0.5
96,732 - -1.5
96,734 - -1.1
96,736 - +0.1
96,751 + -0.2
96,757 + -0.2
96,761 - +0.0
96,765 + +0.8
96,779 - -1.8
96,784 - -0.6
96,787 + -0.1
96,792 - -0.8
96,820 + +0.4
96,896 + +0.1
96,914 + +0.2
96,932 - +0.5

Or see this region's nucleotide sequence