Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5256

Experiment: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5256: 13624 - SUPERFAMILY--SSF53448, at 292,144 to 293,863 13624

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
291,455 + -1.5
291,587 - +0.3
291,589 + +1.3
291,602 + -0.7
291,727 - -0.6
291,745 + -0.9
291,745 + -0.2
291,747 + +1.1
291,753 + +0.0
291,754 + -0.9
291,756 - -1.7
291,757 + -2.4
291,758 - -1.3
291,826 + +0.0
291,835 + +0.4
291,923 - +0.0
292,115 - -1.2
292,130 + +0.0
292,286 + +0.6
292,699 - 13624 mRNA_5256 0.32 -0.0
293,052 - 13624 mRNA_5256 0.53 +1.0
293,080 + 13624 mRNA_5256 0.54 +1.3
293,460 + 13624 mRNA_5256 0.77 +1.0
293,631 - 13624 mRNA_5256 0.86 +0.7
294,099 - +0.1
294,199 + +1.2
294,365 + +1.5
294,376 + +0.2
294,509 + -0.5
294,514 + -1.0
294,534 + +0.0
294,672 + +0.1
294,679 + -0.5
294,686 + -0.0
294,692 + +0.9
294,696 + +0.7
294,700 + +0.0
294,700 - -0.1
294,725 + -0.3
294,797 + +0.7
294,861 + -0.2

Or see this region's nucleotide sequence