Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5392

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5392: 13760 - KOG0166 Karyopherin (importin) alpha, at 636,605 to 638,927 13760

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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635,630 + -0.3
635,664 + -2.6
635,844 + -0.2
636,119 - +1.2
636,216 + +0.3
636,241 + +0.4
636,371 + +1.4
636,386 + +0.3
636,393 + +0.7
636,414 + +1.2
636,532 - -1.0
636,535 - -0.0
636,536 + +1.1
636,560 - -0.6
636,561 + +0.3
636,580 + -0.5
639,035 - -2.2
639,359 + +0.4
639,481 - -0.3
639,654 + +0.0
639,778 - +0.7
639,809 + +0.3
639,844 - -0.6
639,889 - +1.0
639,922 + -1.2

Or see this region's nucleotide sequence