Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5506

Experiment: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13874 and 13875 are separated by 98 nucleotides mRNA_5506: 13874 - KOG2504 Monocarboxylate transporter, at 257,318 to 259,586 13874 mRNA_5507: 13875 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 259,685 to 261,151 13875

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
256,360 + -0.1
256,530 + +1.2
256,793 + -0.7
256,951 - -1.1
257,091 + -0.1
257,384 - -0.1
257,404 + +0.1
257,486 - -0.5
257,539 - +0.6
257,558 - 13874 mRNA_5506 0.11 +0.0
257,656 + 13874 mRNA_5506 0.15 -0.1
257,700 - 13874 mRNA_5506 0.17 +0.6
258,139 - 13874 mRNA_5506 0.36 +0.9
258,280 + 13874 mRNA_5506 0.42 +1.1
258,553 - 13874 mRNA_5506 0.54 -0.6
258,821 + 13874 mRNA_5506 0.66 +0.2
259,182 - 13874 mRNA_5506 0.82 +0.5
259,451 + -0.4
259,895 - 13875 mRNA_5507 0.14 -0.4
260,510 + 13875 mRNA_5507 0.56 -0.6

Or see this region's nucleotide sequence