Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5739

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14106 and 14107 are separated by 816 nucleotides14107 and 14108 are separated by 448 nucleotides mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815,382 to 817,330 14106 mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818,147 to 820,488 14107 mRNA_5740: 14108 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 820,937 to 822,719 14108

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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817,293 - -0.1
817,439 - -0.4
817,441 + -0.1
817,449 - -0.9
817,455 + -0.5
817,470 + +0.2
817,603 - +0.4
817,604 - +0.4
817,613 + +0.8
817,619 - +0.4
817,621 + +0.4
817,785 + -0.9
817,879 - +0.2
817,882 - +1.1
817,886 + -0.6
817,894 + -1.2
817,909 + +0.0
817,909 - -1.0
817,913 - +0.2
817,914 + +0.2
817,917 + +0.1
817,925 + +0.3
818,033 + -0.6
818,044 - -0.3
818,050 - +0.3
818,051 - +1.3
818,052 + +0.8
818,053 + -0.1
818,055 + -0.2
818,065 - -0.2
818,081 + -0.9
818,083 - +0.2
821,474 - 14108 mRNA_5740 0.30 -0.3

Or see this region's nucleotide sequence