Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6262

Experiment: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14629 and 14630 are separated by 464 nucleotides mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383,014 to 384,624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385,089 to 388,417 14630

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
384,188 + 14629 mRNA_6261 0.73 -3.0
384,494 - +0.6
384,502 - +0.4
384,654 - +0.2
384,686 - -0.1
384,779 - +0.5
384,801 - +0.9
384,803 - +0.3
384,812 + +0.1
384,823 - -0.4
384,848 - +0.3
384,850 - +0.2
384,867 + -1.1
384,877 - -1.2
384,883 - +1.5
384,893 - +0.7
384,894 - +0.1
384,897 + -0.1
384,897 + +0.0
384,899 + +0.4
384,900 + -1.0
384,905 - +1.4
384,933 + -1.5
384,934 - +0.2
384,934 - +0.1
384,939 + -2.0
384,940 - +0.1
384,940 - +0.3
384,946 + -0.3
384,955 + -0.2
384,964 - +0.6
384,976 + +1.5
384,983 - +0.2
384,993 - -0.1
385,074 - -0.3
385,079 - +0.1
385,080 + +0.5
385,087 - +1.6
385,091 + +0.3
385,092 - +0.9
385,186 + +0.2
385,217 + -0.5
385,257 - -0.4
385,276 + -1.6
385,297 - +0.5
385,329 - +0.6
385,332 + +0.3
385,363 - +0.1
385,389 - +2.2
385,394 - +0.3
385,401 - +0.8
385,558 + 14630 mRNA_6262 0.14 +1.1
385,671 - 14630 mRNA_6262 0.17 +0.7
385,682 + 14630 mRNA_6262 0.18 +0.7
385,812 - 14630 mRNA_6262 0.22 +0.9
385,928 + 14630 mRNA_6262 0.25 +0.9
385,989 + 14630 mRNA_6262 0.27 -0.3
385,995 + 14630 mRNA_6262 0.27 -0.0
386,007 - 14630 mRNA_6262 0.28 -0.1
386,055 - 14630 mRNA_6262 0.29 -1.5
386,263 - 14630 mRNA_6262 0.35 +0.6
386,275 - 14630 mRNA_6262 0.36 -0.5
386,279 - 14630 mRNA_6262 0.36 -0.5
386,537 + 14630 mRNA_6262 0.43 +0.5
386,832 - 14630 mRNA_6262 0.52 -0.4
387,021 + 14630 mRNA_6262 0.58 -0.1
387,559 - 14630 mRNA_6262 0.74 +0.6
387,704 + 14630 mRNA_6262 0.79 +2.0
387,844 - 14630 mRNA_6262 0.83 -0.1
387,873 - 14630 mRNA_6262 0.84 +0.8
388,028 + 14630 mRNA_6262 0.88 +0.4
388,129 - -0.2
388,420 + -0.6
388,553 - -0.3
388,577 - -0.8
388,610 - -0.8
388,620 + +0.2
388,737 + +1.7
388,739 - +0.2
388,824 - +0.6
388,849 + +0.4
388,880 - -0.9
389,000 - -0.0
389,015 + -3.5
389,022 + -0.5
389,026 - -1.0
389,027 + +0.3
389,147 + +0.1

Or see this region's nucleotide sequence