Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6350

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14717 and 14718 are separated by 575 nucleotides mRNA_6349: 14717 - BLAST NADH dehydrogenase [ubiquinone] 1 beta subcomplex..., at 607,266 to 607,793 14717 mRNA_6350: 14718 - K01749 hemC, HMBS hydroxymethylbilane synthase, at 608,369 to 610,484 14718

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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608,075 - +1.2
608,086 - -0.6
608,122 + +0.3
608,123 + +0.1
608,139 + -1.0
608,297 - +0.8
610,455 + +0.8
610,617 + +0.3
610,726 + -0.5
610,905 + -0.6
610,935 - +1.0

Or see this region's nucleotide sequence