Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6755

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15122 and 15123 are separated by 157 nucleotides15123 and 15124 are separated by 121 nucleotides mRNA_6754: 15122 - K15542 PFS2 polyadenylation factor subunit 2, at 62,668 to 65,062 15122 mRNA_6755: 15123 - K14319 RANGAP1 Ran GTPase-activating protein 1, at 65,220 to 66,894 15123 mRNA_6756: 15124 - K02906 RP-L3, MRPL3, rplC large subunit ribosomal protein L3, at 67,016 to 68,273 15124

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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64,888 + +1.6
66,969 + +1.2
66,976 - -0.1
66,980 + +0.6
67,016 + -0.9

Or see this region's nucleotide sequence