Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7192

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15559 and 15560 are separated by 277 nucleotides15560 and 15561 are separated by 859 nucleotides mRNA_7191: 15559 - Hypothetical Protein, at 1,086,657 to 1,088,494 15559 mRNA_7192: 15560 - Hypothetical Protein, at 1,088,772 to 1,091,031 15560 mRNA_7193: 15561 - K03678 RRP45, EXOSC9 exosome complex component RRP45, at 1,091,891 to 1,093,190 15561

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,087,941 - 15559 mRNA_7191 0.70 -0.6
1,088,803 + +0.4
1,088,935 + +0.0
1,090,133 - 15560 mRNA_7192 0.60 -0.5
1,091,097 - -0.0
1,091,116 - -0.6
1,091,146 - -2.2
1,091,147 - +1.4
1,091,149 + -0.9
1,091,164 - -0.4
1,091,304 + -0.5
1,091,436 - -0.8
1,091,445 - +0.6
1,091,446 + +0.2
1,091,463 - +0.1
1,091,483 + +0.5
1,091,486 + -0.2
1,091,499 - -0.4
1,091,504 - -0.5
1,091,504 - -1.5
1,091,511 - +1.1
1,091,511 + +0.6
1,091,558 + +1.4
1,091,648 + -0.2
1,091,650 - -0.4
1,091,733 - -0.1
1,091,736 - +0.1
1,091,747 + -0.8
1,091,779 + -0.4
1,091,792 - -0.8
1,091,804 - -0.4

Or see this region's nucleotide sequence