Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7363

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15730 and 15731 are separated by 94 nucleotides15731 and 15732 are separated by 397 nucleotides mRNA_7362: 15730 - K13035 NIT4 beta-cyano-L-alanine hydratase/nitrilase, at 93,946 to 95,192 15730 mRNA_7363: 15731 - SUPERFAMILY--SSF48371, at 95,287 to 98,403 15731 mRNA_7364: 15732 - KOG1337 N-methyltransferase, at 98,801 to 102,847 15732

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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94,449 + 15730 mRNA_7362 0.40 -0.7
94,582 + 15730 mRNA_7362 0.51 +0.1
94,591 + 15730 mRNA_7362 0.52 -0.5
94,675 - 15730 mRNA_7362 0.58 +0.6
94,717 - 15730 mRNA_7362 0.62 +0.3
94,809 + 15730 mRNA_7362 0.69 -2.5
94,839 - 15730 mRNA_7362 0.72 -0.1
94,906 - 15730 mRNA_7362 0.77 +0.4
95,183 + -0.9
98,656 - +0.2
98,792 + +1.3
98,797 - -0.4
98,817 + -0.6
98,912 - -0.9
99,035 + -0.3
99,107 - +0.5
99,213 + 15732 mRNA_7364 0.10 +0.5
99,218 + 15732 mRNA_7364 0.10 -0.2

Or see this region's nucleotide sequence