Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7617

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15984 and 15985 are separated by 597 nucleotides mRNA_7616: 15984 - K00706 E2.4.1.34 1,3-beta-glucan synthase, at 684,881 to 690,807 15984 mRNA_7617: 15985 - Hypothetical Protein, at 691,405 to 692,628 15985

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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690,893 + -3.7
691,065 + +0.5
691,073 - +0.3
691,101 + -0.3
691,114 + +0.8
691,164 - +0.1
691,185 + +0.4
691,220 + +0.3
691,239 - -0.0
691,264 + +2.3
691,265 - -0.4
691,354 - -0.0
691,369 - +0.6
691,469 + -0.4
691,629 + 15985 mRNA_7617 0.18 -0.1
691,715 + 15985 mRNA_7617 0.25 -0.3
691,735 + 15985 mRNA_7617 0.27 +0.1
691,799 - 15985 mRNA_7617 0.32 -0.4
691,808 - 15985 mRNA_7617 0.33 +0.0
691,831 + 15985 mRNA_7617 0.35 +0.2
692,003 + 15985 mRNA_7617 0.49 -1.0
692,039 - 15985 mRNA_7617 0.52 -0.3
692,183 - 15985 mRNA_7617 0.64 +0.3
692,245 + 15985 mRNA_7617 0.69 -1.0
692,461 + 15985 mRNA_7617 0.86 -0.0
692,508 - +0.3
692,619 + +0.9
692,629 + -0.1
692,637 + +0.2
692,752 + -0.3
692,764 - +0.3
692,775 + -0.9
692,781 - +0.1
692,783 - +0.6
692,791 - +0.4
692,796 - -1.8
692,806 + -3.0
692,806 + +0.2
692,815 + -1.7
692,818 - +0.2
692,820 - +0.5
692,822 + -0.1
692,822 - -1.1
692,824 + +0.2
692,824 - +1.3
692,830 + +0.3
692,831 + +0.3
692,831 + +0.1
692,836 + +0.6
692,837 + +0.6
692,839 + -0.2
692,841 - -0.3
692,844 - +1.3
692,846 - -1.7
692,847 + -0.5
692,851 + +0.3
692,851 + +0.1
692,851 + +0.6
692,853 - -0.6
692,853 - -1.4
692,853 + +0.3
692,869 + -0.2
692,869 + +0.7
692,877 + -0.5
692,880 - +1.7
692,888 + -0.8
692,889 - -1.1
692,890 + -0.2
692,892 - +1.6
692,893 + +0.6
692,898 - -0.5
692,901 - +0.4
692,902 - -0.7
692,902 - +0.3
692,903 - +1.5
692,914 - +0.3
692,962 - -0.9
692,982 + -0.2
693,001 - +0.6
693,011 + -0.8
693,028 - +0.2
693,037 - +0.1
693,041 + +0.1
693,043 + -0.3
693,049 - +0.4
693,060 - +0.5
693,063 + +0.3
693,073 + +0.3
693,077 + +0.3
693,102 + -0.3
693,181 + +0.3
693,186 + -0.2
693,190 - +0.7
693,192 - -0.1
693,192 - -0.9
693,193 + +0.6
693,197 + -1.1
693,197 - +0.1
693,198 + -1.4
693,200 + +1.3
693,201 - -1.1
693,203 + +0.2
693,213 + +0.3
693,214 + -0.2
693,219 - +0.2
693,223 + +0.1
693,232 + +0.1
693,233 - -0.0
693,242 - +0.4
693,244 - +0.8
693,244 - +0.4
693,255 - -0.7
693,271 + +0.5
693,277 + -0.5
693,286 - +1.1
693,287 + +0.3
693,291 - +0.2
693,297 - +0.2
693,305 - +0.4
693,312 + +1.4
693,315 + +0.6
693,326 - +1.8
693,330 - -0.4
693,344 - -0.7
693,349 + +0.4
693,370 + +0.6
693,375 - -1.2
693,379 - +2.0
693,383 - +0.2
693,389 + +0.5
693,390 - +0.3
693,400 - -0.1
693,401 - -1.0
693,401 + -1.1
693,408 - -0.0
693,413 + +0.5
693,416 + +0.4
693,419 - +0.2
693,424 + -0.2
693,436 + +1.8
693,437 + +0.3
693,445 + +0.2
693,453 + -1.2
693,457 + +0.3
693,461 - +0.7
693,465 - +0.4
693,465 - -0.4
693,466 - -0.4
693,466 - -1.3
693,467 + +1.2
693,468 - +0.9
693,473 + -0.3
693,478 - -0.6
693,479 + +0.4
693,492 + -0.2
693,499 - -0.7
693,499 - +0.7
693,500 + +0.6
693,532 + +0.7
693,541 + +0.0
693,613 + -0.4

Or see this region's nucleotide sequence