Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8138

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16505 and 16506 are separated by 180 nucleotides mRNA_8137: 16505 - K00586 DPH5 diphthine methyl ester synthase, at 505,150 to 506,230 16505 mRNA_8138: 16506 - Hypothetical Protein, at 506,411 to 507,790 16506

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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506,146 + -0.5
506,259 + -0.7
506,261 + -2.3
506,284 - +0.3
506,416 + +1.0
506,996 - 16506 mRNA_8138 0.42 +0.2
506,999 - 16506 mRNA_8138 0.43 +0.4
507,416 + 16506 mRNA_8138 0.73 +0.4
507,564 - 16506 mRNA_8138 0.84 -0.0
507,732 + -0.6
507,837 + +0.6
507,862 - +0.0
507,877 + +3.6
507,884 - -0.7
507,893 + -0.5
507,919 - +0.4
507,999 + -0.1
507,999 - +0.4
508,011 - +0.5
508,016 + +0.9
508,034 - -0.2
508,036 - -0.1
508,037 + -0.0
508,041 - -0.2
508,041 - +0.0
508,041 - +0.6
508,050 - -0.1
508,055 - -2.7
508,059 - +0.1
508,068 + +0.3
508,069 + +0.8
508,085 - +0.4
508,116 - -0.4
508,196 - -0.0
508,219 - -0.2
508,351 + +0.1
508,507 + +0.5
508,640 - +0.3
508,659 + -0.2
508,673 - +0.4
508,683 - +1.1
508,686 + -1.1

Or see this region's nucleotide sequence