Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_23

Experiment: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8390 and 8391 are separated by 246 nucleotides8391 and 8392 are separated by 964 nucleotides mRNA_22: 8390 - SUPERFAMILY--SSF51045, at 61,179 to 62,127 8390 mRNA_23: 8391 - K02938 RP-L8e, RPL8 large subunit ribosomal protein L8e, at 62,374 to 63,560 8391 mRNA_24: 8392 - Hypothetical Protein, at 64,525 to 65,394 8392

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
61,523 - 8390 mRNA_22 0.36 +0.0
61,849 + 8390 mRNA_22 0.71 +0.4
61,852 + 8390 mRNA_22 0.71 +0.3
61,854 + 8390 mRNA_22 0.71 +0.3
61,984 + 8390 mRNA_22 0.85 +0.9
62,188 + +0.0
63,971 + +0.5
63,972 + +0.5
64,112 - +0.6
64,113 - +0.4
64,114 + +0.2
64,127 - -1.6
64,134 - +0.5
64,230 - +0.4
64,243 - +0.5
64,264 + +0.7
64,279 + +1.1
64,412 + -0.3
64,548 - -1.0

Or see this region's nucleotide sequence