Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_914

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9281 and 9282 are separated by 415 nucleotides9282 and 9283 are separated by 306 nucleotides mRNA_913: 9281 - Hypothetical Protein, at 2,180,276 to 2,181,730 9281 mRNA_914: 9282 - K10903 HUS1 HUS1 checkpoint protein, at 2,182,146 to 2,183,559 9282 mRNA_915: 9283 - K01950 E6.3.5.1, NADSYN1, QNS1, nadE NAD+ synthase (glutamine-hydrolysing), at 2,183,866 to 2,186,903 9283

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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2,181,336 + 9281 mRNA_913 0.73 -0.0
2,181,730 - +1.0
2,181,911 + -0.2
2,181,926 - -0.2
2,182,197 + -1.0
2,182,896 - 9282 mRNA_914 0.53 +0.5
2,183,333 + 9282 mRNA_914 0.84 -0.9
2,183,689 + -0.2
2,183,816 + -0.2
2,184,335 - 9283 mRNA_915 0.15 -0.7

Or see this region's nucleotide sequence