Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_969

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9337 and 9338 are separated by 177 nucleotides mRNA_969: 9337 - Hypothetical Protein, at 99,924 to 100,860 9337 mRNA_970: 9338 - Hypothetical Protein, at 101,038 to 101,526 9338

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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98,971 + +0.6
98,975 + -0.6
98,986 - +0.1
99,008 + -0.1
99,141 - +0.9
99,395 - -0.6
99,400 + +0.9
99,401 + +1.4
99,402 - +1.0
99,402 + +0.5
99,402 - -3.4
99,403 - -0.4
99,407 + -1.0
99,407 + +0.7
99,409 - +1.6
99,410 - +0.8
99,412 - +1.1
99,413 - +0.2
99,415 + +0.4
99,422 - +0.0
99,425 + +0.6
99,574 + +0.1
99,587 - +0.6
99,743 + +0.2
99,756 - +0.2
99,852 - -0.8
99,870 - -0.3
99,875 - -0.7
99,886 - +0.2
100,001 - +0.8
100,148 + 9337 mRNA_969 0.24 -0.5
100,163 + 9337 mRNA_969 0.26 +0.4
100,421 + 9337 mRNA_969 0.53 +0.8
101,027 - +0.8
101,032 + -3.0
101,033 + -0.0
101,579 + +0.1

Or see this region's nucleotide sequence