Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1949

Experiment: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10316 and 10317 are separated by 491 nucleotides mRNA_1948: 10316 - K08176 PHO84 MFS transporter, PHS family, inorganic phosphate transporter, at 580,409 to 582,858 10316 mRNA_1949: 10317 - KOG0254 Predicted transporter (major facilitator superfamily), at 583,350 to 585,589 10317

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
582,858 + -0.3
582,866 + +0.5
582,871 - -0.8
582,882 + +1.3
583,075 + +0.0
583,127 - +0.7
583,402 + +0.4
583,847 + 10317 mRNA_1949 0.22 -1.5
584,446 - 10317 mRNA_1949 0.49 +0.3
585,015 + 10317 mRNA_1949 0.74 -0.3
585,282 + 10317 mRNA_1949 0.86 +1.2
585,282 + 10317 mRNA_1949 0.86 +0.3
585,283 - 10317 mRNA_1949 0.86 -0.9
585,297 - 10317 mRNA_1949 0.87 +0.8
585,426 - -0.9
585,427 + -1.4
585,436 - +1.0
585,450 + +0.8
585,455 - -1.4
585,460 + -1.5
585,469 + +0.5
585,584 - -0.5
585,595 - -1.4
585,599 - -0.3
585,729 - +1.8
585,737 - -0.3
585,947 + -0.5
586,188 - -0.8

Or see this region's nucleotide sequence