Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2232

Experiment: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10600 and 10601 are separated by 73 nucleotides mRNA_2232: 10600 - Hypothetical Protein, at 424,627 to 425,038 10600 mRNA_2233: 10601 - Hypothetical Protein, at 425,112 to 425,465 10601

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
424,080 - -0.8
424,209 - -0.1
424,260 - +1.6
424,411 - +1.1
424,664 - +2.6
424,734 - 10600 mRNA_2232 0.26 +2.3
424,800 + 10600 mRNA_2232 0.42 +1.1
424,874 + 10600 mRNA_2232 0.60 -1.6
424,996 + 10600 mRNA_2232 0.90 -0.1
425,016 - -3.1
425,022 - -0.2
425,086 - -1.9
425,268 - 10601 mRNA_2233 0.44 -0.5
425,271 + 10601 mRNA_2233 0.45 -1.9
425,298 + 10601 mRNA_2233 0.53 -1.1
425,443 - +0.2
425,628 + -0.6
425,716 + +0.7

Or see this region's nucleotide sequence