Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2320

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2320: 10688 - HMMPfam-Carboxylesterase family-PF00135,SUPERFAMILY--SSF53474, at 599,987 to 602,471 10688

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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599,148 - -0.0
599,154 - +1.5
599,154 + -0.3
599,178 - -0.2
599,316 - +1.5
599,317 + +0.7
599,321 - +1.2
599,463 - -0.4
599,868 - +1.4
599,890 + +1.0
599,902 - +0.3
599,905 + +1.5
599,909 + +0.3
600,029 + +1.6
600,064 - +0.8
600,482 - 10688 mRNA_2320 0.20 +1.1
601,187 + 10688 mRNA_2320 0.48 +0.5
601,342 - 10688 mRNA_2320 0.55 +1.3
601,409 + 10688 mRNA_2320 0.57 +1.3
601,636 - 10688 mRNA_2320 0.66 +0.8
601,639 + 10688 mRNA_2320 0.66 -1.2
602,175 - 10688 mRNA_2320 0.88 -1.0
602,188 + 10688 mRNA_2320 0.89 +1.2
602,209 - 10688 mRNA_2320 0.89 +1.6
602,218 + 10688 mRNA_2320 0.90 +2.2
602,497 + +0.1
602,665 + -0.0
602,674 - +1.7
602,700 - +0.3
602,705 + +0.5
602,861 + +1.4
603,251 - +2.5

Or see this region's nucleotide sequence