Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2373

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10740 and 10741 are separated by 751 nucleotides mRNA_2372: 10740 - Hypothetical Protein, at 738,819 to 739,851 10740 mRNA_2373: 10741 - K08286 E2.7.11.- protein-serine/threonine kinase, at 740,603 to 745,355 10741

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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739,929 - +0.5
740,161 + +0.6
741,345 + 10741 mRNA_2373 0.16 +1.4
741,346 + 10741 mRNA_2373 0.16 +2.1
741,810 + 10741 mRNA_2373 0.25 +2.2
741,935 - 10741 mRNA_2373 0.28 +1.1
742,279 - 10741 mRNA_2373 0.35 +2.9
742,522 - 10741 mRNA_2373 0.40 +2.8
743,113 - 10741 mRNA_2373 0.53 +1.5
743,351 + 10741 mRNA_2373 0.58 +1.5
743,552 + 10741 mRNA_2373 0.62 +1.2
744,104 + 10741 mRNA_2373 0.74 +1.9
744,132 - 10741 mRNA_2373 0.74 +0.0
744,136 + 10741 mRNA_2373 0.74 +0.8
744,319 - 10741 mRNA_2373 0.78 -0.2
744,553 - 10741 mRNA_2373 0.83 +0.9
745,417 - +0.5
745,418 + +0.5
745,429 - +0.5
745,557 - +0.7
745,573 + -1.5
745,729 + +0.3
745,832 - -1.1
745,851 - -0.9
745,859 + +1.0
745,874 + +1.0
746,168 - -0.1

Or see this region's nucleotide sequence