Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2464

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10831 and 10832 are separated by 775 nucleotides mRNA_2463: 10831 - Hypothetical Protein, at 200,051 to 202,030 10831 mRNA_2464: 10832 - Hypothetical Protein, at 202,806 to 204,474 10832

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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201,958 + +1.9
202,094 + +0.1
202,109 + +0.1
202,117 - +0.6
202,127 - +0.5
202,215 - -1.1
202,218 + +0.4
202,244 - +1.6
202,252 - +2.5
202,255 + -0.7
202,256 - -0.7
202,264 + -0.5
202,266 - -0.4
202,270 - +0.9
202,270 + -0.4
202,279 + -1.1
202,279 - -1.5
202,279 - +0.1
202,282 - -1.0
202,288 + -0.2
202,288 + +1.1
202,328 + +1.1
202,329 - +1.0
202,362 - -2.0
202,376 - +0.2
202,376 - -0.1
202,378 + +1.1
202,378 - +0.0
202,380 - -0.8
202,424 + +0.3
202,427 + -0.5
202,432 - -0.9
202,434 + -1.3
202,439 + -0.2
202,442 - -0.6
202,442 + +0.8
202,444 + +0.3
202,447 + -0.2
202,449 + +1.6
202,450 - -0.7
202,452 + -1.1
202,452 + +0.2
202,458 + -0.6
202,461 - +0.3
202,462 + +0.4
202,465 + +1.0
202,465 - +0.0
202,474 + -0.4
202,476 + -0.1
202,488 + +0.3
202,489 + +1.5
202,491 + -0.2
202,493 + +1.4
202,499 - -0.1
202,501 - -0.5
202,502 + -1.3
202,507 - -1.3
202,520 + +0.1
202,524 + -0.5
202,524 + +0.8
202,525 - +0.8
202,535 - -0.9
202,544 + +1.4
202,546 - -1.8
202,552 - -1.0
202,562 + +1.0
202,580 - -0.5
202,594 + -0.4
202,597 - +0.2
202,625 - -0.9
202,680 - +0.4
202,683 + +1.7
202,695 + +0.0
202,705 - +1.4
202,716 - +2.2
202,730 + +1.1
202,733 - -0.4
202,744 - -1.2
202,769 + -0.8

Or see this region's nucleotide sequence