Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2467

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2467: 10835 - Hypothetical Protein, at 216,514 to 218,202 10835

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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215,542 - -0.4
215,638 - +0.0
215,662 + -1.7
215,668 - -0.2
216,081 + -0.8
216,117 - +0.2
216,141 - +0.4
216,168 + -1.0
216,282 - -1.5
216,293 + -0.0
216,297 + -0.2
216,298 + -0.2
216,302 - +1.9
216,403 - -0.0
216,409 - -0.2
216,446 + +0.4
216,450 + +1.4
216,543 + +3.3
216,562 - +1.0
216,564 - +0.4
216,595 - +0.8
217,721 + 10835 mRNA_2467 0.71 -1.0
217,727 + 10835 mRNA_2467 0.72 -0.1
217,998 + 10835 mRNA_2467 0.88 -0.1
218,001 + 10835 mRNA_2467 0.88 -0.5
218,037 - -0.4
218,120 - +2.2
218,130 + -0.6
218,133 - -0.8
218,137 - -0.3
218,160 + -0.2
218,198 + +0.8
218,261 + +0.8
218,280 + -1.5
218,282 + -0.8
218,287 + +1.1
218,288 - +0.1
218,289 + +1.8
218,295 + -0.2
218,302 + +0.7
218,306 - -0.4
218,306 - -1.0
218,308 + +0.6
218,340 - -0.1
218,343 - -0.8
218,343 + -1.3
218,344 - +1.3
218,350 - -0.2
218,361 - +0.3
218,367 - -0.0
218,392 + -0.0
218,427 - -0.2
218,456 + +1.3
218,482 - +0.4
218,506 + -1.7
218,507 - +0.0
218,561 + -0.9
218,561 + +0.2
218,570 + -0.7
218,573 + -0.4
218,594 + -0.3
218,609 - +1.8
218,642 - -1.1
218,651 + +0.3
218,657 - -0.9
218,659 + -0.6
218,671 - -0.7
218,677 - +0.6
218,747 - -0.9
218,766 - +0.6
218,788 - +1.2
218,794 - -0.6
218,802 + +0.1
218,817 - +0.5
218,830 + +0.5
218,924 - +0.1
218,926 + +0.9
218,947 - +0.0
218,951 - +1.0
218,952 - +0.5
218,954 - +0.0
218,961 - -0.2
218,962 - +0.3
218,969 + +0.7
219,087 - -0.5

Or see this region's nucleotide sequence