Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2939

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11306 and 11307 are separated by 551 nucleotides11307 and 11308 are separated by 903 nucleotides mRNA_2938: 11306 - Hypothetical Protein, at 595,318 to 600,734 11306 mRNA_2939: 11307 - K17807 TAM41, MMP37 mitochondrial translocator assembly and maintenance protein 41, at 601,286 to 603,136 11307 mRNA_2940: 11308 - SUPERFAMILY--SSF56300, at 604,040 to 607,064 11308

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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600,943 - +2.4
600,960 - +0.4
601,002 + +1.4
601,166 - -0.2
601,185 - -0.4
603,214 - -0.1
603,219 + -0.4
603,388 + -0.4
603,390 - -0.4
603,396 - -1.5
603,514 + +0.2
603,517 - -0.3
603,527 + -0.6
603,528 + +0.0
603,536 + +0.8
603,539 + -0.2
603,546 + -0.3
603,700 - -0.2
603,712 - +0.9
603,713 + +1.5
603,716 - +1.0
603,724 + +0.7
603,741 - +0.2
603,742 + -0.1
603,750 + -1.1
603,764 - -0.3
603,814 - -0.6
603,830 - +0.1
603,831 + -0.5
603,839 + +0.6
603,839 - -0.0
603,842 + +0.5
603,848 - -0.5
603,872 + +1.0
603,888 + +0.3
603,995 - -0.1

Or see this region's nucleotide sequence