Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3018

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_3018: 11386 - Hypothetical Protein, at 95,831 to 96,130 11386

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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95,335 + -0.4
95,430 + +0.5
95,434 - +0.0
95,604 - -0.2
95,736 - -1.1
95,985 + 11386 mRNA_3018 0.51 +0.6
96,131 - -1.0
96,162 - +0.5
96,192 + -0.5
96,463 - -0.4
96,626 + -0.5
96,630 - -0.4
96,631 + -1.3
96,635 + -1.6
96,641 - +1.6
96,643 - +0.1
96,644 + -0.4
96,653 - -0.3
96,672 - +0.7
96,771 - +0.6
96,782 - -0.1
96,801 - +0.1
96,808 - +0.9
96,930 + -0.2
96,930 - -2.4
96,938 + +0.3
96,952 - -0.5
97,019 - +0.2
97,122 - +0.3
97,130 - -0.4
97,130 + -0.1

Or see this region's nucleotide sequence