Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3731

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_3731: 12099 - K00820 glmS, GFPT glucosamine--fructose-6-phosphate aminotransferase (isomerizing), at 449,924 to 452,631 12099

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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448,945 + +0.0
453,266 - +0.3
453,268 + +0.0
453,269 - -1.0
453,280 + +0.7
453,286 + +0.7
453,392 + -0.2
453,411 - -0.0
453,427 - -3.0
453,432 - +0.3
453,554 - -0.3

Or see this region's nucleotide sequence