Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4336

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4336: 12704 - K05863 SLC25A4S, ANT solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31, at 1,937,307 to 1,938,868 12704

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,936,446 + -0.9
1,936,539 - -0.6
1,936,572 + -0.2
1,936,572 - -0.4
1,936,579 + +1.5
1,936,594 - +0.3
1,936,735 - -0.8
1,936,781 - +0.8
1,936,862 + +0.1
1,936,879 - +1.6
1,937,012 + -1.5
1,937,017 - +0.2
1,937,037 + +1.1
1,937,092 - -0.2
1,937,117 + -0.5
1,937,117 - -0.4
1,937,124 - -0.7
1,937,137 - -0.4
1,937,139 - -1.6
1,937,139 - -1.3
1,937,144 - -0.2
1,937,145 - -0.7
1,937,146 - -1.6
1,937,147 - +0.4
1,937,147 + -0.4
1,937,147 + -0.0
1,937,147 + -1.4
1,937,148 - -0.2
1,937,156 + +1.5
1,937,167 + +0.9
1,937,177 + -1.7
1,937,179 - +0.2
1,937,186 + -2.0
1,938,938 - -1.0
1,938,941 + +0.0
1,938,949 - +0.4
1,938,953 + -0.9
1,939,047 - -0.3
1,939,052 + +0.7
1,939,061 - +0.4
1,939,206 + +0.1
1,939,211 - +1.5
1,939,218 - +0.1
1,939,383 + +1.2
1,939,605 + +2.1
1,939,732 + -0.5
1,939,831 - -0.2

Or see this region's nucleotide sequence