Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4953

Experiment: YNB Methylricinoleic Acid

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	Sysname	Fraction	YNB Methylricinoleic Acid
1,389,066	+	13320	mRNA_4952	0.78	+0.6
1,389,179	-	13320	mRNA_4952	0.85	+0.1
1,389,182	-	13320	mRNA_4952	0.85	-2.4
1,389,188	+	13320	mRNA_4952	0.85	+2.1
1,389,318	-				+0.2
1,389,338	+				-0.6
1,389,338	+				+0.8
1,389,478	+				-0.2
1,389,504	+				+0.4
1,389,509	-				-1.0
1,389,510	-				+0.2
1,389,533	-				-0.9
1,389,543	-				-0.6
1,389,546	-				-2.4
1,389,552	+				+1.1
1,389,560	-				-1.3
1,389,560	-				+1.1
1,389,562	-				-1.2
1,389,563	+				-0.6
1,389,566	-				+0.1
1,389,568	+				+0.6
1,389,570	+				-0.4
1,389,572	-				+0.4
1,389,575	+				+0.8
1,389,580	-				+0.9
1,389,678	-				-0.3
1,389,702	-				+0.6
1,389,703	+				+0.2
1,389,712	-				-0.3
1,389,712	-				-0.0
1,389,713	+				+0.0
1,389,714	+				+0.6
1,389,720	+				+0.7
1,389,725	+				-0.2
1,389,729	+				-0.2
1,389,734	-				-0.1
1,389,742	-				+0.6
1,389,748	+				-1.7
1,389,855	+	13321	mRNA_4953	0.16	-0.4
1,389,893	+	13321	mRNA_4953	0.19	+0.0
1,390,027	-	13321	mRNA_4953	0.29	-0.7
1,390,029	-	13321	mRNA_4953	0.30	-0.3
1,390,043	-	13321	mRNA_4953	0.31	+0.7
1,390,175	+	13321	mRNA_4953	0.41	+0.2
1,390,192	+	13321	mRNA_4953	0.42	-1.0
1,390,305	-	13321	mRNA_4953	0.50	-1.6
1,390,419	+	13321	mRNA_4953	0.59	+0.7
1,390,468	-	13321	mRNA_4953	0.63	-1.1
1,390,473	+	13321	mRNA_4953	0.63	-1.9
1,390,473	+	13321	mRNA_4953	0.63	-0.5
1,390,704	+	13321	mRNA_4953	0.81	+1.7
1,391,075	-				+1.7
1,391,145	-				+1.0
1,391,149	-				-1.1
1,391,151	-				-0.2
1,391,157	-				-0.3
1,391,158	-				+0.1
1,391,164	+				+1.5
1,391,169	+				-1.8
1,391,203	+				+1.2
1,391,267	-				+0.3
1,391,276	-				-0.4
1,391,285	+				+0.4
1,391,291	+				-0.7
1,391,291	-				-0.6
1,391,304	-				+0.4
1,391,310	+				+0.2
1,391,313	+				+0.8
1,391,314	+				+0.2
1,391,332	-				-0.9
1,391,334	-				-1.0
1,391,334	+				-1.9
1,391,335	-				+0.5
1,391,335	+				-0.4
1,391,336	-				-0.4
1,391,343	+				+0.3
1,391,344	+				+1.5
1,391,368	-				+0.6
1,391,385	+				-0.2
1,391,395	+				+0.7
1,391,399	+				+0.6
1,391,401	-				-1.8
1,391,405	-				-0.5
1,391,414	+				-0.6
1,391,414	-				+0.1
1,391,414	+				-0.7
1,391,416	+				+2.2
1,391,420	-				-2.3
1,391,426	+				-0.4
1,391,429	+				+0.2
1,391,430	-				-0.8
1,391,431	+				-1.5
1,391,432	-				-0.5
1,391,432	-				+0.1
1,391,437	-				-0.1
1,391,442	+				+0.1
1,391,452	+				+0.1
1,391,452	+				-2.0
1,391,452	+				-1.4
1,391,454	-				-0.2
1,391,457	-				+0.8
1,391,458	-				+1.8
1,391,467	+				-0.4
1,391,472	+				-1.3
1,391,493	-				+0.3
1,391,511	-				-0.6
1,391,515	+				+0.4
1,391,545	+				+0.1
1,391,588	+				+0.8
1,391,596	+				+1.1
1,391,609	-	13322	mRNA_4954	0.11	+1.0
1,391,617	-	13322	mRNA_4954	0.12	-0.9
1,391,620	+	13322	mRNA_4954	0.12	-1.0
1,391,627	+	13322	mRNA_4954	0.13	-1.3
1,391,723	-	13322	mRNA_4954	0.23	+3.5
1,391,728	+	13322	mRNA_4954	0.24	+0.9
1,391,739	-	13322	mRNA_4954	0.25	+0.2
1,391,744	-	13322	mRNA_4954	0.26	+1.3
1,391,750	-	13322	mRNA_4954	0.26	-0.9
1,391,751	-	13322	mRNA_4954	0.26	+0.5
1,391,762	-	13322	mRNA_4954	0.28	-0.2
1,391,765	+	13322	mRNA_4954	0.28	+0.4
1,391,774	+	13322	mRNA_4954	0.29	+0.4
1,391,777	-	13322	mRNA_4954	0.29	+0.6
1,391,809	+	13322	mRNA_4954	0.33	-1.5
1,391,833	+	13322	mRNA_4954	0.35	+0.9
1,391,838	+	13322	mRNA_4954	0.36	-1.0
1,391,866	+	13322	mRNA_4954	0.39	+2.2
1,391,900	+	13322	mRNA_4954	0.43	-1.8
1,391,909	+	13322	mRNA_4954	0.44	-0.8