Experiment: YNB Methylricinoleic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertions' strand.
Conventionally, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
13380 and 13381 are separated by 232 nucleotides
mRNA_5012: 13380 - K01886 QARS, glnS glutaminyl-tRNA synthetase, at 1,542,746 to 1,545,688
13380
mRNA_5013: 13381 - BLAST regulatory protein wetA [Paracoccidioides lutzii ..., at 1,545,921 to 1,548,060
13381
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Per-strain Table Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid remove 1,545,370 - 13380 mRNA_5012 0.89 -1.1 1,545,682 + -0.1 1,546,444 + 13381 mRNA_5013 0.24 -0.3 1,546,547 + 13381 mRNA_5013 0.29 +0.1 1,546,547 - 13381 mRNA_5013 0.29 +1.4 1,546,567 - 13381 mRNA_5013 0.30 +0.3 1,547,000 - 13381 mRNA_5013 0.50 -0.8 1,547,024 + 13381 mRNA_5013 0.52 -0.2 1,547,167 - 13381 mRNA_5013 0.58 +0.6 1,547,308 - 13381 mRNA_5013 0.65 +0.3 1,547,357 - 13381 mRNA_5013 0.67 +1.3 1,547,439 + 13381 mRNA_5013 0.71 +0.3 1,547,579 - 13381 mRNA_5013 0.77 +1.7 1,547,614 - 13381 mRNA_5013 0.79 +2.4 1,547,770 - 13381 mRNA_5013 0.86 +1.4 1,547,780 - 13381 mRNA_5013 0.87 -0.1 1,547,786 + 13381 mRNA_5013 0.87 +0.1 1,547,906 - +3.0 1,547,915 - +0.1 1,547,917 - +0.6 1,547,933 - +0.9 1,547,952 + +0.3 1,547,976 + +1.9 1,547,980 + -0.5 1,547,981 - -1.7 1,547,982 - +0.1 1,548,002 + +1.3 1,548,029 - -0.2 1,548,036 + -0.1 1,548,037 - +1.7 1,548,042 + +1.1 1,548,044 - +3.0 1,548,053 + +0.7 1,548,057 + -0.8 1,548,059 + +0.2 1,548,060 + +1.5 1,548,063 + -0.4 1,548,069 - +0.1 1,548,069 + -1.9 1,548,077 - -0.3 1,548,082 - +0.2 1,548,097 - +1.9 1,548,119 - -0.1 1,548,120 + -0.1 1,548,125 - +0.4 1,548,132 + -0.6 1,548,132 + +0.3 1,548,134 + +0.9 1,548,134 + +0.1 1,548,135 - +0.4 1,548,157 - +0.9 1,548,160 - +0.6 1,548,171 - -1.5 1,548,172 - +0.7 1,548,181 - +1.0 1,548,193 + +2.2 1,548,195 - +0.3 1,548,201 - +1.1 1,548,208 + -0.6 1,548,212 - -0.4 1,548,212 + +0.5 1,548,218 - -0.3 1,548,220 - -0.3 1,548,241 - -0.6 1,548,271 + -0.3 1,548,279 + -0.4 1,548,297 - -0.0 1,548,299 - -0.5 1,548,302 + -0.4 1,548,305 - -1.9 1,548,311 - +0.8 1,548,311 - -0.8 1,548,342 + -0.3 1,548,346 - +2.0 1,548,355 - -0.6 1,548,361 + +0.7 1,548,362 + -0.5 1,548,363 - -1.4 1,548,365 + +1.0 1,548,369 - -0.0 1,548,375 + -1.0 1,548,380 - +0.3 1,548,385 - -0.5 1,548,385 - +0.5 1,548,397 - -0.1 1,548,398 - -1.5 1,548,403 + +0.5 1,548,404 - +0.0 1,548,411 + +0.7 1,548,412 - -0.9 1,548,416 + +0.4 1,548,421 - -0.1 1,548,423 + +0.3 1,548,426 + +0.1 1,548,435 + +0.9 1,548,461 - +1.2 1,548,488 + +0.2 1,548,503 - -0.1 1,548,544 + +0.2 1,548,571 + -0.8 1,548,594 - -0.0 1,548,609 - +1.1 1,548,613 + -0.6 1,548,616 - -2.5 1,548,627 - +1.2 1,548,631 - -0.9 1,548,633 - +0.1 1,548,643 - +0.7 1,548,651 + +0.7 1,548,654 - -0.3 1,548,655 - +0.4 1,548,655 + -0.5 1,548,662 - +0.3 1,548,665 + +0.2 1,548,676 - +2.1 1,548,716 + -2.0 1,548,724 + -1.5 1,548,725 - -0.7 1,548,757 - -0.2 1,548,757 + -0.2 1,548,760 + +0.3 1,548,761 - +0.3 1,548,806 - +0.4 1,548,825 + -1.4 1,548,829 - +2.0 1,548,858 + -0.1 1,548,904 - -0.1 1,548,947 - +0.8 1,548,951 + -0.6 1,548,959 + -0.0 1,549,046 - -0.4
Or see this region's nucleotide sequence