Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5185

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5185: 13553 - K01210 E3.2.1.58 glucan 1,3-beta-glucosidase, at 97,438 to 100,447 13553

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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96,449 + -1.4
96,585 + -0.2
96,586 + -1.0
96,601 - -2.1
96,603 + -0.4
96,606 + -1.9
96,610 + -2.6
96,702 - -1.1
96,730 - +1.5
96,732 - -1.1
96,734 - -1.6
96,736 - +1.0
96,751 + -0.4
96,757 + -1.1
96,761 - +0.2
96,765 + -0.3
96,779 - -3.7
96,784 - -1.9
96,787 + -3.8
96,792 - -2.7
96,820 + +0.7
96,896 + -2.8
96,914 + -0.5
96,932 - -0.6
100,504 - +1.4
100,635 + -0.4
100,646 - -0.1
100,687 + -0.5
100,731 - -0.3
100,845 - -1.6
100,851 - +0.7
100,855 - -0.6
101,137 - -0.1

Or see this region's nucleotide sequence