Experiment: YNB Methylricinoleic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertions' strand.
Conventionally, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
14246 and 14247 are separated by 341 nucleotides 14247 and 14248 are separated by 275 nucleotides
mRNA_5878: 14246 - KOG4210 Nuclear localization sequence binding protein, at 1,146,916 to 1,148,820
14246
mRNA_5879: 14247 - KOG2624 Triglyceride lipase-cholesterol esterase, at 1,149,162 to 1,152,280
14247
mRNA_5880: 14248 - HMMPfam-Transglycosylase SLT domain-PF01464,SUPERFAMILY--SSF53955, at 1,152,556 to 1,154,002
14248
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Per-strain Table Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid remove 1,148,852 + +1.3 1,148,854 + +0.8 1,148,912 + -0.1 1,148,918 - +0.9 1,148,928 - -0.5 1,148,928 + +0.6 1,148,939 + +0.7 1,148,940 - +0.2 1,148,942 + -0.4 1,148,942 + -0.3 1,148,947 - -0.2 1,148,948 - -0.2 1,148,949 - +0.4 1,148,957 + +0.3 1,148,957 - +0.0 1,148,987 + +2.1 1,149,088 - +0.3 1,149,107 - -1.2 1,149,108 + -1.5 1,149,114 - -1.3 1,149,137 - -1.0 1,149,141 - -1.2 1,149,151 - +0.7 1,149,151 - +1.9 1,149,153 - +0.8 1,149,182 - +0.6 1,149,290 - +0.7 1,149,309 + +0.2 1,149,441 + +0.4 1,149,474 + 14247 mRNA_5879 0.10 +1.1 1,149,606 + 14247 mRNA_5879 0.14 -0.5 1,149,701 - 14247 mRNA_5879 0.17 +0.3 1,149,720 - 14247 mRNA_5879 0.18 +0.2 1,149,891 - 14247 mRNA_5879 0.23 -0.1 1,150,309 - 14247 mRNA_5879 0.37 +1.0 1,150,748 + 14247 mRNA_5879 0.51 -0.8 1,150,874 - 14247 mRNA_5879 0.55 +1.5 1,151,635 + 14247 mRNA_5879 0.79 -0.2 1,151,731 + 14247 mRNA_5879 0.82 +1.4 1,152,021 + +0.2 1,152,052 + -0.2 1,152,059 + -0.6 1,152,494 + +0.2 1,152,574 - -0.5 1,152,667 + +0.5 1,152,703 + 14248 mRNA_5880 0.10 -0.1 1,152,760 - 14248 mRNA_5880 0.14 -2.6 1,152,906 - 14248 mRNA_5880 0.24 +0.6 1,153,025 - 14248 mRNA_5880 0.32 +0.8 1,153,049 - 14248 mRNA_5880 0.34 -0.0 1,153,056 + 14248 mRNA_5880 0.35 +0.6 1,153,149 - 14248 mRNA_5880 0.41 +0.7 1,153,162 - 14248 mRNA_5880 0.42 +1.6 1,153,164 + 14248 mRNA_5880 0.42 -2.2 1,153,227 + 14248 mRNA_5880 0.46 -1.2
Or see this region's nucleotide sequence