Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5930

Experiment: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14298 and 14299 are separated by 146 nucleotides mRNA_5930: 14298 - Hypothetical Protein, at 1,261,131 to 1,261,763 14298 mRNA_5931: 14299 - SUPERFAMILY--SSF51695, at 1,261,910 to 1,263,239 14299

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
1,261,051 - +0.2
1,261,573 - 14298 mRNA_5930 0.70 +1.2
1,261,670 - 14298 mRNA_5930 0.85 +0.6
1,261,802 - +0.8
1,261,878 + +0.2
1,261,982 - +0.4
1,261,986 + -0.2
1,262,175 + 14299 mRNA_5931 0.20 +1.2
1,262,301 - 14299 mRNA_5931 0.29 -1.2
1,262,302 + 14299 mRNA_5931 0.29 -0.8
1,262,714 - 14299 mRNA_5931 0.60 +1.2

Or see this region's nucleotide sequence