Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5983

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14350 and 14351 are separated by 697 nucleotides mRNA_5982: 14350 - KOG0379 Kelch repeat-containing proteins, at 1,373,446 to 1,378,307 14350 mRNA_5983: 14351 - Hypothetical Protein, at 1,379,005 to 1,379,613 14351

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,378,052 + +0.7
1,378,178 - +1.5
1,378,196 + +0.9
1,378,199 + +1.8
1,378,239 + +1.0
1,378,295 - -0.8
1,378,303 + -0.6
1,378,350 - -0.2
1,378,646 + +0.4
1,378,650 - +0.1
1,378,673 - +0.6
1,378,779 - +1.7
1,378,793 - +0.1
1,378,800 - -0.6
1,378,811 + -0.5
1,378,811 + -0.6
1,378,814 - +1.4
1,378,821 + -0.5
1,378,824 + +0.8
1,378,825 + +1.4
1,378,846 + +1.0
1,378,848 - +0.9
1,378,848 - +0.6
1,378,949 - -0.0
1,379,081 - 14351 mRNA_5983 0.12 +0.9
1,379,385 - 14351 mRNA_5983 0.62 +0.1
1,379,663 + -1.0
1,379,668 + +1.6
1,379,672 - -0.9
1,379,684 - -1.4
1,379,788 - +0.2
1,380,025 - +0.6
1,380,104 - +0.3
1,380,435 + +1.7
1,380,514 + +0.5
1,380,525 - +1.6
1,380,534 - +0.6

Or see this region's nucleotide sequence