Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6121

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6121: 14489 - KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family, at 49,647 to 51,616 14489

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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48,756 + -0.2
48,786 + -0.2
48,798 - +0.8
48,886 - -1.4
49,195 - -0.7
49,790 - -0.7
50,754 - 14489 mRNA_6121 0.56 +0.2
50,914 - 14489 mRNA_6121 0.64 +0.9
51,137 + 14489 mRNA_6121 0.76 +0.4
51,775 + -3.2
51,967 - +2.4
52,603 + +2.3

Or see this region's nucleotide sequence