Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6666

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15033 and 15034 are separated by 228 nucleotides15034 and 15035 are separated by 278 nucleotides mRNA_6665: 15033 - K01952 purL, PFAS phosphoribosylformylglycinamidine synthase, at 1,389,385 to 1,393,556 15033 mRNA_6666: 15034 - K18423 CSE1, CAS, XPO2 exportin-2 (importin alpha re-exporter), at 1,393,785 to 1,397,625 15034 mRNA_6667: 15035 - Hypothetical Protein, at 1,397,904 to 1,402,835 15035

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,392,940 - 15033 mRNA_6665 0.85 -2.3
1,393,689 - -0.2

Or see this region's nucleotide sequence