Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6846

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6846: 15214 - K02603 ORC1 origin recognition complex subunit 1, at 260,829 to 263,990 15214

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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259,907 + +2.9
260,031 + +1.1
260,159 + +1.2
260,283 - +0.3
260,326 + -1.4
260,421 - +0.5
260,433 + +0.1
260,439 - +0.2
260,444 + -0.7
260,450 + -0.5
260,508 - -0.3
260,575 - +0.6
260,751 + +1.3
260,752 + +1.4
260,754 - -0.4
260,963 - -2.1
261,062 - -0.9
261,209 - 15214 mRNA_6846 0.12 +1.9
261,414 - 15214 mRNA_6846 0.19 -2.0
262,352 + 15214 mRNA_6846 0.48 +1.6
264,067 - -1.7
264,248 - -0.5
264,400 + -2.0
264,551 + -0.2
264,583 + +0.2
264,707 + -0.2
264,709 - -0.1
264,857 + +0.1
264,858 - -0.3
264,868 - -0.0
264,870 - -0.8
264,872 - -1.9
264,875 + +0.5
264,877 + -1.6
264,886 + +1.5
264,893 - -0.2
264,897 - -0.6
264,906 - +0.3
264,907 - -0.2
264,925 - -0.7
264,981 + +0.1

Or see this region's nucleotide sequence