Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6857

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15225 and 15226 are separated by 934 nucleotides mRNA_6857: 15225 - Hypothetical Protein, at 292,496 to 294,098 15225 mRNA_6858: 15226 - SUPERFAMILY--SSF103473, at 295,033 to 296,248 15226

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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291,662 + +1.6
291,838 + +1.1
291,975 + -0.4
292,093 + +1.4
292,120 + -0.3
292,236 + +0.7
292,413 - -0.6
292,491 - -0.1
292,501 - -0.1
292,601 - -0.1
292,686 + 15225 mRNA_6857 0.12 -0.4
292,693 + 15225 mRNA_6857 0.12 +0.1
292,703 + 15225 mRNA_6857 0.13 +1.1
292,963 - 15225 mRNA_6857 0.29 -0.6
293,161 - 15225 mRNA_6857 0.41 -0.3
293,318 - 15225 mRNA_6857 0.51 +0.7
293,331 + 15225 mRNA_6857 0.52 -0.0
293,338 - 15225 mRNA_6857 0.53 +0.0
293,433 + 15225 mRNA_6857 0.58 +0.3
293,564 - 15225 mRNA_6857 0.67 +0.7
293,923 - 15225 mRNA_6857 0.89 +0.5
294,024 - -0.8
294,097 - -0.4
294,166 + +0.8
294,374 + -0.3
294,742 + +1.6
294,850 + +0.0
294,888 - -0.2
294,894 + -0.4
294,919 + +0.1
295,088 + -0.1

Or see this region's nucleotide sequence