Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7155

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15522 and 15523 are separated by 218 nucleotides mRNA_7154: 15522 - Hypothetical Protein, at 1,005,619 to 1,007,584 15522 mRNA_7155: 15523 - Hypothetical Protein, at 1,007,803 to 1,008,291 15523

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,006,886 + 15522 mRNA_7154 0.64 -0.8
1,007,332 + 15522 mRNA_7154 0.87 -0.9
1,007,487 + -0.0
1,007,659 - +1.0
1,007,775 - -0.7
1,007,797 - +0.3
1,007,942 - 15523 mRNA_7155 0.28 -1.0
1,008,076 + 15523 mRNA_7155 0.56 +0.3
1,008,082 + 15523 mRNA_7155 0.57 +1.0
1,008,216 - 15523 mRNA_7155 0.84 +0.3
1,008,217 + 15523 mRNA_7155 0.85 +2.4
1,008,235 + 15523 mRNA_7155 0.88 +0.4
1,008,344 - -0.1
1,008,352 - +0.9
1,008,353 + +0.2
1,008,500 + -0.1
1,008,507 + +1.5
1,008,525 + +0.9
1,008,616 - +0.5
1,008,663 + +1.0
1,008,667 + +0.8
1,008,695 - -1.1
1,008,695 - +1.0
1,008,784 - +1.3
1,008,788 - -2.5
1,008,807 - +1.2
1,009,096 - +1.1

Or see this region's nucleotide sequence