Experiment: YNB Methylricinoleic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertions' strand.
Conventionally, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
15571 and 15572 are separated by 397 nucleotides 15572 and 15573 are separated by 493 nucleotides
mRNA_7203: 15571 - SUPERFAMILY--SSF52047, at 1,116,612 to 1,117,999
15571
mRNA_7204: 15572 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 1,118,397 to 1,120,170
15572
mRNA_7205: 15573 - Hypothetical Protein, at 1,120,664 to 1,121,084
15573
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Per-strain Table Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid remove 1,117,588 + 15571 mRNA_7203 0.70 -1.1 1,117,625 + 15571 mRNA_7203 0.73 -1.1 1,117,745 - 15571 mRNA_7203 0.82 +1.3 1,117,933 + -0.4 1,118,154 - +0.9 1,118,455 + +0.3 1,118,514 - -0.7 1,118,634 + 15572 mRNA_7204 0.13 -0.6 1,119,225 + 15572 mRNA_7204 0.47 -0.6 1,119,325 - 15572 mRNA_7204 0.52 +0.1 1,119,820 + 15572 mRNA_7204 0.80 -0.5 1,119,924 + 15572 mRNA_7204 0.86 -0.2 1,120,039 - +1.6 1,120,055 - +0.6 1,120,060 - -0.2 1,120,071 - +0.5 1,120,104 + -0.9 1,120,224 + -0.7 1,120,228 - -1.2 1,120,229 + +2.0 1,120,234 + +0.4 1,120,237 + -0.2 1,120,258 + +0.5 1,120,363 + -0.1 1,120,421 + +1.0 1,120,479 + +0.1 1,120,484 + +0.4 1,120,506 - -0.5 1,120,516 + +0.9 1,120,569 + -0.5 1,120,582 - -1.2 1,120,584 + +0.9 1,120,828 + 15573 mRNA_7205 0.39 +0.2 1,120,835 + 15573 mRNA_7205 0.41 -1.5 1,120,838 + 15573 mRNA_7205 0.41 -0.5 1,120,864 + 15573 mRNA_7205 0.48 +0.1 1,120,926 - 15573 mRNA_7205 0.62 -0.2 1,120,968 - 15573 mRNA_7205 0.72 -1.1 1,120,969 - 15573 mRNA_7205 0.72 -0.3 1,120,970 + 15573 mRNA_7205 0.73 -0.3 1,120,980 + 15573 mRNA_7205 0.75 -0.5 1,121,002 + 15573 mRNA_7205 0.80 -1.6 1,121,050 + -0.0 1,121,103 + +0.3 1,121,104 + +1.1 1,121,116 - +0.1 1,121,137 + -0.1 1,121,141 + +0.3 1,121,152 + -1.9 1,121,153 - +0.2 1,121,153 - -1.6 1,121,154 - +0.2 1,121,166 - +0.8 1,121,170 - -0.1
Or see this region's nucleotide sequence