Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7617

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15984 and 15985 are separated by 597 nucleotides mRNA_7616: 15984 - K00706 E2.4.1.34 1,3-beta-glucan synthase, at 684,881 to 690,807 15984 mRNA_7617: 15985 - Hypothetical Protein, at 691,405 to 692,628 15985

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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690,893 + -3.5
691,065 + +0.2
691,073 - -1.1
691,101 + -1.1
691,114 + -1.4
691,164 - +0.3
691,185 + -0.4
691,220 + +0.7
691,239 - -0.5
691,264 + +1.5
691,265 - -0.3
691,354 - -0.8
691,369 - +1.0
691,469 + +0.5
691,629 + 15985 mRNA_7617 0.18 -0.4
691,715 + 15985 mRNA_7617 0.25 -0.3
691,735 + 15985 mRNA_7617 0.27 -0.1
691,799 - 15985 mRNA_7617 0.32 +0.6
691,808 - 15985 mRNA_7617 0.33 +0.4
691,831 + 15985 mRNA_7617 0.35 +0.3
692,003 + 15985 mRNA_7617 0.49 -1.9
692,039 - 15985 mRNA_7617 0.52 -0.9
692,183 - 15985 mRNA_7617 0.64 +0.2
692,245 + 15985 mRNA_7617 0.69 -0.1
692,461 + 15985 mRNA_7617 0.86 +0.8
692,508 - -0.7
692,619 + +0.6
692,629 + -0.2
692,637 + +0.1
692,752 + -1.1
692,764 - -0.3
692,775 + -1.2
692,781 - -0.1
692,783 - +0.6
692,791 - +0.7
692,796 - +1.2
692,806 + -2.4
692,806 + +0.3
692,815 + -0.3
692,818 - -1.8
692,820 - -0.6
692,822 + +0.3
692,822 - -0.1
692,824 + -0.8
692,824 - -1.2
692,830 + -0.3
692,831 + -0.4
692,831 + -0.2
692,836 + -0.5
692,837 + -1.2
692,839 + +1.5
692,841 - +1.5
692,844 - -0.2
692,846 - -0.7
692,847 + -0.3
692,851 + +0.4
692,851 + +0.0
692,851 + +0.2
692,853 - +1.7
692,853 - -1.6
692,853 + -5.4
692,869 + +0.9
692,869 + -1.3
692,877 + -1.3
692,880 - +0.7
692,888 + +1.1
692,889 - -0.7
692,890 + +0.2
692,892 - +1.5
692,893 + -1.2
692,898 - +0.6
692,901 - +0.6
692,902 - -0.4
692,902 - -0.8
692,903 - -0.4
692,914 - +1.1
692,962 - +0.0
692,982 + +0.3
693,001 - -0.9
693,011 + +0.8
693,028 - +0.1
693,037 - +1.0
693,041 + +0.5
693,043 + -1.2
693,049 - +0.1
693,060 - +1.8
693,063 + -0.3
693,073 + -0.2
693,077 + +0.2
693,102 + -0.3
693,181 + +0.0
693,186 + +1.0
693,190 - +1.2
693,192 - +0.1
693,192 - -0.1
693,193 + -0.2
693,197 + -2.4
693,197 - +0.2
693,198 + +2.2
693,200 + +1.0
693,201 - -1.4
693,203 + +1.6
693,213 + +0.1
693,214 + -0.6
693,219 - +0.5
693,223 + +0.2
693,232 + +0.1
693,233 - +0.1
693,242 - -0.1
693,244 - +1.5
693,244 - -0.1
693,255 - -0.3
693,271 + +0.2
693,277 + -0.1
693,286 - +1.3
693,287 + -0.1
693,291 - -0.2
693,297 - +0.4
693,305 - +0.4
693,312 + -0.6
693,315 + +0.5
693,326 - -0.1
693,330 - -0.5
693,344 - -1.3
693,349 + +0.3
693,370 + +1.3
693,375 - -0.5
693,379 - -1.3
693,383 - +0.8
693,389 + -0.9
693,390 - +0.8
693,400 - -0.2
693,401 - -1.6
693,401 + -2.7
693,408 - -2.2
693,413 + +1.0
693,416 + -0.5
693,419 - +0.1
693,424 + -1.5
693,436 + -0.4
693,437 + -1.3
693,445 + +1.1
693,453 + -0.1
693,457 + +1.3
693,461 - -1.0
693,465 - -0.2
693,465 - +0.5
693,466 - -1.8
693,466 - -1.4
693,467 + -0.3
693,468 - +0.4
693,473 + -0.2
693,478 - +0.3
693,479 + -0.9
693,492 + +1.2
693,499 - -1.4
693,499 - +0.0
693,500 + +0.3
693,532 + -0.3
693,541 + +0.5
693,613 + -0.1

Or see this region's nucleotide sequence