Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7664

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16032 and 16033 are separated by 207 nucleotides mRNA_7664: 16032 - K07904 RAB11A Ras-related protein Rab-11A, at 794,964 to 796,238 16032 mRNA_7665: 16033 - K13119 FAM50, XAP5 protein FAM50, at 796,446 to 798,090 16033

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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793,968 - -0.2
793,977 - -0.4
793,994 + +0.6
794,005 + +0.7
794,006 - +2.0
794,008 - -1.0
794,009 + -1.4
794,034 + -0.3
794,035 + -2.2
794,037 + +2.4
794,053 + +0.4
794,058 + -0.7
794,071 - -0.8
794,074 + +0.5
794,077 - +0.8
794,078 + -0.8
794,081 + +0.1
794,082 + +0.2
794,093 - +1.1
794,096 - +1.2
794,098 - +0.1
794,104 + +0.2
794,105 - +0.2
794,115 + +0.1
794,117 + -1.0
794,122 - -0.3
794,122 - +0.4
794,123 - -0.8
794,127 - +1.0
794,130 + +1.2
794,134 + -0.0
794,135 - -0.5
794,136 - +1.0
794,138 + -0.1
794,141 + +1.4
794,152 - -0.5
794,155 + -1.8
794,161 + -0.3
794,162 - -0.6
794,164 - +0.9
794,164 - -1.3
794,165 - +0.6
794,167 - +0.4
794,168 + +1.0
794,174 + -1.9
794,175 + -0.5
794,177 - -0.1
794,177 + -0.8
794,179 - +0.0
794,180 - +0.2
794,180 - +0.1
794,182 + -0.1
794,184 + +0.4
794,185 + -0.1
794,185 - +2.1
794,186 + +0.5
794,187 - +1.6
794,187 - +1.3
794,202 - +0.1
794,203 + -1.4
794,203 + +0.2
794,203 - +0.9
794,204 + +1.3
794,206 + -1.1
794,209 + +0.2
794,210 - -0.1
794,223 - +0.8
794,227 - +0.0
794,227 + +0.2
794,229 + -0.2
794,230 - -0.2
794,233 + +0.5
794,233 - -1.1
794,236 - -1.4
794,237 + +0.3
794,238 + +1.3
794,240 - -0.0
794,245 - -1.1
794,245 - -1.1
794,248 + -0.4
794,248 - +1.3
794,252 - -1.1
794,253 - +0.6
794,259 - -0.9
794,259 + -0.2
794,261 + +0.6
794,262 + -2.0
794,265 + +1.1
794,267 - +1.2
794,278 - +0.9
794,281 - +1.7
794,283 + -1.3
794,292 + +0.4
794,372 + -2.5
794,396 + +0.0
794,418 + -0.8
794,422 + -0.7
794,427 + -0.4
794,447 + -0.0
794,453 - +2.5
794,459 + +0.0
794,496 - -0.5
794,517 - +1.0
794,521 - -0.2
794,525 + +1.0
794,529 + -0.3
794,542 - +0.2
794,555 + +0.6
794,556 + +0.8
794,558 + +0.6
794,561 - +0.1
794,563 + -0.2
794,568 + +0.8
794,575 + -0.0
794,576 - +0.1
794,578 - +0.8
794,596 + -1.4
794,597 + +0.7
794,620 + -0.4
794,624 - +0.8
794,689 + +0.9
794,697 - +0.3
794,697 - -0.4
794,703 - +0.0
794,703 + +0.4
794,715 - +0.1
794,722 - -0.3
794,727 - +0.5
794,732 - +1.3
794,737 - -0.2
794,747 + +0.2
794,751 - -0.8
794,761 + -0.3
794,766 + +1.3
794,769 + +0.3
794,771 + +0.5
794,888 + +0.4
794,891 + -0.6
794,959 - +1.4
795,574 - 16032 mRNA_7664 0.48 -3.9
796,342 + +1.0
796,352 - +1.7
796,358 - +0.3
796,359 + +2.0
796,359 - -1.3
796,367 - -0.3
796,376 + -0.0

Or see this region's nucleotide sequence