Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7994

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16361 and 16362 are separated by 131 nucleotides mRNA_7993: 16361 - Hypothetical Protein, at 165,037 to 166,382 16361 mRNA_7994: 16362 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 166,514 to 167,452 16362

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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165,559 + 16361 mRNA_7993 0.39 -1.5
165,758 - 16361 mRNA_7993 0.54 -0.0
165,987 - 16361 mRNA_7993 0.71 -0.6
166,180 + 16361 mRNA_7993 0.85 +0.2
166,244 - 16361 mRNA_7993 0.90 +0.1
166,278 + +0.5
166,725 - 16362 mRNA_7994 0.22 -0.2
166,769 + 16362 mRNA_7994 0.27 +0.6
166,868 + 16362 mRNA_7994 0.38 -1.0
167,024 - 16362 mRNA_7994 0.54 +0.3
167,071 - 16362 mRNA_7994 0.59 +0.9
167,220 - 16362 mRNA_7994 0.75 +1.6
167,346 - 16362 mRNA_7994 0.89 +1.5
167,348 - 16362 mRNA_7994 0.89 -0.4
167,385 - +1.0
167,392 - +0.1
167,396 + -1.3
167,396 + +0.8
167,698 - -0.1
167,811 + +0.1

Or see this region's nucleotide sequence