Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8407

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16774 and 16775 are separated by 51 nucleotides16775 and 16776 are separated by 289 nucleotides mRNA_8406: 16774 - K06883 K06883 uncharacterized protein, at 1,142,762 to 1,144,384 16774 mRNA_8407: 16775 - K18914 FDXR adrenodoxin-NADP+ reductase, at 1,144,436 to 1,146,110 16775 mRNA_8408: 16776 - Hypothetical Protein, at 1,146,400 to 1,148,528 16776

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,146,489 + -1.6
1,146,567 + +1.4
1,146,604 + +0.3
1,146,629 + 16776 mRNA_8408 0.11 +1.9
1,146,656 - 16776 mRNA_8408 0.12 +2.3
1,146,659 + 16776 mRNA_8408 0.12 -1.8
1,146,855 + 16776 mRNA_8408 0.21 +0.2
1,147,016 + 16776 mRNA_8408 0.29 +1.6
1,147,017 + 16776 mRNA_8408 0.29 +1.3
1,147,059 + 16776 mRNA_8408 0.31 +1.2

Or see this region's nucleotide sequence